Suffix array

Results: 94



#Item
71Burrows–Wheeler transform / Transforms / Suffix array / Suffix tree / Search engine indexing / RNA-Seq / Chip-sequencing / Ccat / Rank / Information science / Biology / Science

Bowtie: A Highly Scalable Tool for Post-Genomic Datasets Ben Langmead ([removed]) Work with: Cole Trapnell, Mihai Pop, Steven Salzberg NCBI Seminar November 10, 2008

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Source URL: www.cbcb.umd.edu

Language: English - Date: 2009-01-27 16:19:45
72Burrows–Wheeler transform / Transforms / Search algorithms / Suffix tree / Search engine indexing / Suffix array / Backtracking / FM-index / Database index / Information science / Information retrieval / Information

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome Ben Langmead, Cole Trapnell, Mihai Pop, and Steven L. Salzberg Center for Bioinformatics and Computation Biology, University of Maryland

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Source URL: www.cbcb.umd.edu

Language: English - Date: 2009-01-27 16:27:12
73Arrays / Suffix array / Pattern / Skip / ALGOL 68 / Interval tree / Icon / Computing / Software engineering / Computer programming

Proceedings of the International Multiconference on Computer Science and Information Technology pp. 505–511 ISBN[removed]9 ISSN[removed]

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Source URL: proceedings2010.imcsit.org

Language: English - Date: 2010-12-02 12:49:25
74Arrays / Computational linguistics / Natural language processing / Markov models / Suffix array / N-gram / Suffix tree / Language model / Trie / Computing / Computer programming / Science

Enhanced Suffix Arrays as Language Models: Virtual k-testable Languages Herman Stehouwer and Menno van Zaanen TiCC, Tilburg University, Tilburg, The Netherlands {J.H.Stehouwer, M.M.vanZaanen}@uvt.nl

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Source URL: ilk.uvt.nl

Language: English - Date: 2014-01-29 05:19:03
75Suffix tree / Time complexity / String matching algorithms / String searching algorithm / Trie / Dynamic programming / Suffix array / Knuth–Morris–Pratt algorithm / Theoretical computer science / String / Applied mathematics

Order-Preserving Suffix Trees and Their Algorithmic Applications Maxime Crochemore4,6 , Costas S. Iliopoulos4,5 , Tomasz Kociumaka1 , Marcin Kubica1 , Alessio Langiu4 , Solon P. Pissis6,7? , Jakub Radoszewski1 , Wojciech

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Source URL: arxiv.org

Language: English - Date: 2013-03-27 20:44:32
76Computer programming / Suffix tree / Support vector machine / Suffix array / String kernel / Linux kernel / Radix tree / Kernel / Statistics / Statistical classification / Computing

Fast Computation of Subpath Kernel for Trees Daisuke Kimura daisuke [removed] Hisashi Kashima [removed]

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Source URL: icml.cc

Language: English - Date: 2012-06-07 13:19:44
77Computer programming / Succinct data structure / Binary tree / Trie / Suffix tree / Bit array / Implicit data structure / B-tree / Search tree / Data structures / Computing / Data management

6.851: Advanced Data Structures Spring 2012 Lecture 17 — April 24 Prof. Erik Demaine

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Source URL: courses.csail.mit.edu

Language: English - Date: 2012-05-15 18:17:38
78Arrays / Data structures / Suffix tree / Compressed suffix array / Suffix array / Bit array / String / Trie / Succinct data structure / Computing / Theoretical computer science / Computer programming

6.851: Advanced Data Structures Spring 2012 Lecture 18 — April 26, 2012 Prof. Erik Demaine

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Source URL: courses.csail.mit.edu

Language: English - Date: 2012-04-30 01:03:01
79Binary trees / Sorting algorithms / Suffix tree / Data structures / Trie / Suffix array / Radix sort / Search tree / Binary search tree / Computing / Graph theory / Computer programming

6.851: Advanced Data Structures Spring 2012 Lecture L16 — April 19, 2012 Prof. Erik Demaine

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Source URL: courses.csail.mit.edu

Language: English - Date: 2012-05-29 13:10:42
80Dynamic programming / Formal languages / Arrays / Suffix array / Suffix tree / Longest common substring problem / Linguistic morphology / Substring / Longest repeated substring problem / String / Mathematics / Computing

PDF Document

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Source URL: media.wiley.com

Language: English - Date: 2013-08-24 07:18:22
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